Plot beta clusters

Functions converting input list of clusters and corresponding ids into a .html page visualizing the results as a 3D Plot

plot_clusters_js(beta_cluster, id_cluster, save_path, img_path=None, mark_outliers=False, mark_timestamp=True, filename='3d_beta_plot', write=True, show_res=True)

Creates a .html visualization of input data

Parameters:

Name	Type	Description	Default
beta_cluster	Sequence	Numpy array containing beta clusters	required
id_cluster	Union[np.ndarray, Sequence]	Numpy array or sequence containing the ids samples in clusters. Must be of same structure as beta_clusters	required
save_path	str	Where to save the .html visualization	required
img_path	Union[None, str]	Path to images of samples	None
mark_outliers	bool	Set to True if first entry in beta_cluster are outliers	False
mark_timestamp	bool	Set to True if name of visualization shall contain time of creation. If set to False, visualization will override previous file	True
filename	str	Name of .hmtl file	'3d_beta_plot'
write	bool	Set to False to not write .html file and return as string instead	True
show_res	bool	Set to False to not open resulting page in webbrowser	True

Returns:

Name	Type	Description
html_str_formatted	str	If write=False returns .hmtl file as string, else None